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Alignment-Free Rapid Sequence Census Quantification (Kallisto)
Technology Benefits
Hundreds of times faster than standard tools (can quantify 30 million human reads in less than 3 minutes) Increased accuracy, especially compared to programs that shred reads into k-mersTractable to use the bootstrap to determine uncertainty on estimates and includes infrastructure for managing the large amount of data associated with bootstrapped samples
Technology Application
RNA-Seq analysis and quantificationSequence census experiments for copy number variation analysis of DNA sequencingHigh-throughput sequencing
Detailed Technology Description
None
Others
Tech ID/UC Case 25009/2015-156-0 Related Cases 2015-156-0, 2015-121-0
Country/Region
USA
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